Barkova OYu, Azovtseva AI.
Animal Husbandry and Fodder Production. 2026. Vol. 109. No. 2. Р. 133-144.
doi: 10.33284/2658-3135-109-2-133
Original article
Association of the single-nucleotide substitution rs73924131 of the INTS6 gene with meat
productivity in chickens of Tsarskosel’skaya breed
Olga Yu Barkova1, Anastasia I Azovtseva2
1,2 Russian Research Institute of Farm Animal Genetics and Breeding – Branch of the LK Ernst Federal Science Center for Animal Husbandry, Pushkin, Russia
1barkoffws@list.ru, https://orcid.org/0000-0002-0963-905X
2ase4ica15@mail.ru, https://orcid.org/0000-0002-2963-378X
Abstract. Modern industrial poultry farming has achieved high productivity due to intensive genetic selection of meat chicken breeds and the use of genome-wide association studies (GWAS), which enable the identification of genetic regions (QTLs) associated with growth and carcass weight. These studies revealed that the INTS6 gene has a significant impact on chicken weight. However, the association of allelic variants with body weight remains unexplored. The aim of this study is to analyze the association of the single nucleotide substitution rs73924131 of the INTS6 gene with body weight in chickens of Tsarskosel’skaya breed and to analyze the relationship between the transcriptional activity of this gene in muscle tissue and the genotype, body weight, and age of the birds. The study revealed a significant association between rs73924131 (A/G) of the INTS6 gene and the bird weight trait in the Tsarskosel’skaya breed, as well as a significant substitution effect for the AA-GG and AG-GG alleles. The highest body weight indicators were observed in chickens with the AA genotype for mononucleotide substitutions of rs73924131 (A/G) of the INTS6 gene. A significant correlation was established between the INTS6 gene expression level in the pectoral muscle and such traits as live weight, marketable carcass weight, drumstick weight, femur length, chest girth, and chest depth using Spearman's correlation analysis.
Keywords: farm poultry, Gallus gallus domesticus, relative expression level, INTS6, body weight, Spearman’s correlation analysis
Acknowledgments: the work was supported in accordance to the plan of research works for 2024-2026 RRIFAGB (No. 124020200114).
For citation: Barkova OYu, Azovtseva AI. Association of the single-nucleotide substitution rs73924131 of the INTS6 gene with meat productivity in chickens of Tsarskosel’skaya breed. Animal Husbandry and Forage Production. 2026;109(2):133-144. (In Russ.)]. https://doi.org/10.33284/2658-3135-109-2-133
References
- Abdalhag MA, Zhang T, Fan QC, Zhang XQ, Zhang GX, Wang JY, Wei Y, Wang YJ. Single nucleotide polymorphisms associated with growth traits in Jinghai yellow chickens. Genet Mol Res. 2015;14(4):16169-161 doi: 10.4238/2015.December.8.6
- Chen H, Shen H X, Lin YW, Mao Y Q, Liu B, Xie L P. Small RNA-induced INTS6 gene up-regulation suppresses castration-resistant prostate cancer cells by regulating β-catenin signaling. Cell cycle (Georgetown, Tex.). 2018;17(13): 1602-1613. doi: 1080/15384101.2018.1475825
- Fianu I, Ochmann M, Walshe JL, Dybkov O, Cruz JN, Urlaub H, Cramer P. Structural basis of Integrator-dependent RNA polymerase II termination. Nature. 2024;629(8010):219-227. doi: 10.1038/s41586-024-07269-4
- Fujiwara R, Zhai SN, Liang D, Shah AP, Tracey M, Ma XK, Fields CJ, Mendoza-Figueroa MS, Meline MC, Tatomer DC, Yang L, Wilusz JE. IntS6 and the Integrator phosphatase module tune the efficiency of select premature transcription termination events. Mol Cell. 2023;83(24):4445-4460.e7. doi: 10.1016/j.molcel.2023.10.035
- Hudson NJ, Hawken RJ, Okimoto R, Sapp RL, Reverter A. Data compression can discriminate broilers by selection line, detect haplotypes, and estimate genetic potential for complex phenotypes. Poult Sci. 2017;96(9):3031-3038. doi: 10.3382/ps/pex151
- Kapp LD, Abrams EW, Marlow FL, Mullins MC. The integrator complex subunit 6 (Ints6) confines the dorsal organizer in vertebrate embryogenesis. PLoS Genet. 2013;9(10):e1003822. doi: 10.1371/journal.pgen.1003822
- Kim M, Cho E, Munyaneza JP, et al. Genome-wide association study for the free amino acid and nucleotide components of breast meat in an F2 crossbred chicken population. J Anim Sci Technol. 2023;65(1):57-68. doi: 5187/jast.2022.e96
- Li W, Zheng M, Zhao G, Wang J, Liu J, Wang S, Feng F, Liu D, Zhu D, Li Q, Guo L, Guo Y, Liu R, Wen J. Identification of QTL regions and candidate genes for growth and feed efficiency in broilers. Genet Sel Evol. 2021;53(1):13. doi: 10.1186/s12711-021-00608-3
- Meuwissen THE, Hayes B J, Goddard M E. Genomic selection: A paradigm shift in animal breeding. Animal Frontiers. 2016;6(1):6-14. doi: 10.2527/af.2016-0002
- Shiozaki M, Kanno K, Yonezawa S, Otani Y, Shigenobu Y, Haratake D, Murakami E, Oka S, Ito M. Integrator complex subunit 6 promotes hepatocellular steatosis via β-catenin-PPARγ Biochim Biophys Acta Mol Cell Biol Lipids. 2024;1869(7):159532. doi: 10.1016/j.bbalip.2024.159532
- Visscher PM, Wray N R, Zhang Q, Sklar P, McCarthy M I, Brown M A, Yang J. 10 years of GWAS discovery: biology, function, and translation. The American Journal of Human Genetics. 2017;101(1):5-22. doi: 10.1016/j.ajhg.2017.06.005
- Wang WH, Wang JY, Zhang T, Wang Y, Zhang Y, Han K. Genome-wide association study of growth traits in Jinghai Yellow chicken hens using SLAF-seq technology. Anim Genet. 2019;50(2):175-176. doi: 10.1111/age.12346
- Wieland I, Arden KC, Michels Dl, Klein-Hitpass L, Böhm M, Viars CS, Weidle UH. Isolation of DICE1: a gene frequently affected by LOH and downregulated in lung carcinomas. Oncogene. 1999;18(32):4530-4537. doi: 10.1038/sj.onc.1202806
- Xie L, Luo C, Zhang C, Zhang R, Tang J, Nie Q, Ma L, Hu X, Li N, Da Y, Zhang X. Genome-wide association study identified a narrow chromosome 1 region associated with chicken growth traits. PLoS One. 2012;7(2):e30910. doi: 10.1371/journal.pone.0030910
- Yin Z, Spitz MR, Babaian RJ, et al. Limiting the location of a putative human prostate cancer tumor suppressor gene at chromosome 13q14.3. Oncogene. 1999;18(52):7576-7583. doi: 10.1038/sj.onc.1203203
- Yonezawa S, Kanno K, Shiozaki M, Sugiyama M, Ito Integrator complex subunit 6 regulates biological nature of hepatocellular carcinoma by modulating epithelial-mesenchymal transition. Curr Issues Mol Biol. 2025;47(9):733. doi: 10.3390/cimb47090733
- Zhang H, Shen LY, Xu ZC, et al. Haplotype-based genome-wide association studies for carcass and growth traits in chicken. Poult Sci. 2020;99(5):2349-2361. doi: 1016/j.psj.2020.01.009
Information about the authors:
Olga Yu Barkova, Cand. Sci. (Biology), Senior Researcher at the Laboratory of Molecular Genetics, Russian Research Institute of Farm Animal Genetics and Breeding — Branch of the L.K. Ernst Federal Research Center for Animal Husbandry, St. Petersburg, Pushkin, Moskovskoe shosse, 55a, 196601, tel.: 89646116482.
Anastasia I Azovtseva, postgraduate student, Junior Researcher at the Laboratory of Molecular Genetics, Russian Research Institute of Farm Animal Genetics and Breeding — Branch of the L.K. Ernst Federal Research Center for Animal Husbandry, St. Petersburg, Pushkin, Moskovskoe shosse, 55a, 196601, tel.: 89817288692.
The article was submitted 13.02.2026; approved after reviewing 20.04.2026; accepted for publication 15.06.2026.
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